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2022
Horvath S, Lu AT, Haghani A, Zoller JA, Li CZ, Lim AR, Brooke RT, Raj K, Serres-Armero A, Dreger DL, et al. DNA methylation clocks for dogs and humans. Proc Natl Acad Sci U S A. 2022 ;119(21):e2120887119.
2020
Levine AJ, Soontornniyomkij V, Masliah E, Sinsheimer JS, Ji SS, Horvath S, Singer EJ, Kallianpur A, Moore DJ. Correction to: A candidate gene study of intermediate histopathological phenotypes in HIV-associated neurocognitive disorders. J Neurovirol. 2020 ;26(4):509-510.
2019
Sundermann EE, Hussain M, Moore D, Horvath S, Lin DTS, Kobor MS, Levine AJ. Inflammation-related genes are associated with epigenetic aging in HIV. J Neurovirol. 2019 ;25(6):853-865.
2018
Sundermann E, Levine AJ, Horvath S, Moore D. Inflammation-Related Genes are Associated with Accelerated Aging in HIV. 2018 .
Quach A, Horvath S, Nemanim N, Vatakis D, Witt MD, Miller EN, Detels R, Langfelder P, Shapshak P, Singer EJ, et al. No reliable gene expression biomarkers of current or impending neurocognitive impairment in peripheral blood monocytes of persons living with HIV. J Neurovirol. 2018 ;24(3):350-361.
2016
Levine AJ, Quach A, Moore DJ, Achim CL, Soontornniyomkij V, Masliah E, Singer EJ, Gelman B, Nemanim N, Horvath S. Accelerated epigenetic aging in brain is associated with pre-mortem HIV-associated neurocognitive disorders. J Neurovirol. 2016 ;22(3):366-75.
2015
Levine AJ, Quach A, Moore D, Achim C, Soontornniyomkij V, Masliah E, Singer EJ, Gelman B, Nemanim N, Horvath S. Accelerated epigenetic aging in brain is associated with pre-mortem HAND. Journal of Neurovirology. 2015 .
Horvath S, Levine AJ. HIV-1 Infection Accelerates Age According to the Epigenetic Clock. J Infect Dis. 2015 ;212(10):1563-73.
2013
Levine AJ, Miller JA, Shapshak P, Gelman B, Singer EJ, Hinkin CH, Commins D, Morgello S, Grant I, Horvath S. Systems analysis of human brain gene expression: mechanisms for HIV-associated neurocognitive impairment and common pathways with Alzheimer's disease. BMC Medical Genomics [Internet]. 2013 ;6(4). Available from: http://www.ncbi.nlm.nih.gov/pubmed/23406646
Levine AJ, Horvath S, Miller EN, Singer EJ, Shapshak P, Baldwin GC, Martínez-Maza O, Witt MD, Langfelder P. Transcriptome analysis of HIV-infected peripheral blood monocytes: gene transcripts and networks associated with neurocognitive functioning. Journal of Neuroimmunology [Internet]. 2013 ;265(1-2):96-105. Available from: http://www.ncbi.nlm.nih.gov/pubmed/24094461
2011
Miller JS, Levine AJ, Gelman B, Horvath S. Search for common biological pathways in Alzheimer's disease and NeuroAIDS using gene expression microarray. In: Summit on Systems Biology. Summit on Systems Biology. Richmond, VA; 2011.
Levine AJ, Miller JS, Horvath S, Gelman B. Weighted gene co-expression network analysis of NeuroAIDS cognitive disorders. In: Summit on Systems Biology. Summit on Systems Biology. Richmond, VA; 2011.
2010
Levine AJ, Horvath S. Pathways to HIV-associated neurocognitive disorders: A systems biology approach. 2010 .