Bibliography

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Shapshak P, Duncan R, Pandajarasamme K, Charurut S, Sinnott JT, Commins D, Singer EJ, Levine AJ. HIV associated dementia and HIV encephalitis II: Genes on chromosomes 22 expressed in individually microdissected Globus pallidus neurons (Preliminary analysis). Bioinformation. 2011 ;6:183-186.
Shapshak P, Kangueane P, Fujimura RK, Commins D, Chiappelli, F; SE, Levine AJ, Minagar A, Novembre FJ, Somboonwit C, Nath A, et al. Editorial NeuroAIDS Review. AIDS [Internet]. 2011 ;25:123-41. Available from: http://www.ncbi.nlm.nih.gov/pubmed/21076277
Shapshak P, Somboonwit C, Sinnott JT, Commins D, Singer EJ, Levine AJ. Gene-chromosome locations of neuropsychiatric diseases. Bioinformation [Internet]. 2011 ;7:366-8. Available from: http://www.ncbi.nlm.nih.gov/pubmed?term=Gene-Chromosome%20locations%20of%20Neuropsychiatric%20Diseases
Shapshak P, Somboonwit C, Drumright LN, Frost SD, Commins D, Tellinghuisen TL, Scott WK, Duncan R, McCoy CB, Page JB, et al. Molecular and contextual markers of hepatitis C virus and drug abuse. Mol Diagn Ther [Internet]. 2009 ;13:153-79. Available from: http://www.ncbi.nlm.nih.gov/pubmed?term=Molecular%20and%20contextual%20MARKERS%20OF%20HCV%20AND%20DRUG%20ABUSE
Shapshak P, Rodriguez HE, Kayathri R, Levine AJ, Chiappelli F, Minagar A. Alzheimer's disease and HIV associated dementia related genes: I. location and function. Bioinformation [Internet]. 2008 ;2:348-57. Available from: http://www.ncbi.nlm.nih.gov/pubmed?term=18685724
Shapshak P, Minagar A, Kangueane P, Frost SD, Kosakovsky Pond SL, Zarate S, Singer EJ, Commins D, De Groot A, Quinones-Mateu M, et al. Blood and brain HIV strain variation. In: Goodkin K, Shapshak P The Spectrum of NeuroAIDS Disorders: Pathophysiology, Diagnosis, and Treatment. The Spectrum of NeuroAIDS Disorders: Pathophysiology, Diagnosis, and Treatment. ASM Press; 2008.
Shapshak P, Duncan R, Turchan-Cholewo J, Nath A, Minagar A, Kangueane P, Davis W, Chiappelli F, Elkomy FF, Seth R, et al. Bioinformatics models in drug abuse and Neuro-AIDS: Using and developing databases. Bioinformation [Internet]. 2006 ;1(3):86-8. Available from: http://www.ncbi.nlm.nih.gov/pubmed/17597862
Shapshak P, Duncan R, Nath A, Turchan-Cholewo J, Pandjassarame K, Rodriguez H, Duran EM, Ziegler F, Amaro E, Lewis A, et al. Gene chromosomal organization and expression in cultured human neurons exposed to cocaine and HIV-1 proteins gp120 and tat: drug abuse and NeuroAIDS. Frontiers in Bioscience: A Journal and Virtual Library [Internet]. 2006 ;11:1774-93. Available from: http://www.ncbi.nlm.nih.gov/pubmed/16368555
Shapshak P, Minagar A, Duran EM, Ziegler F, Davis W, Seth R, Kazic T. Gene expression in HIV associated dementia. In: Minagar, A.; Alexander JS Inflammatory disorders of the nervous system, clinical aspects, pathogenesis, and management. Inflammatory disorders of the nervous system, clinical aspects, pathogenesis, and management. Totowa, NJ: Humana Press; 2005.
Shapshak P, Duncan R, McCoy CB, Page JB. Quantification of HIV GAG RNA using real time reverse transcriptase PCR. Frontiers in Bioscience: A Journal and Virtual Library [Internet]. 2005 ;10:135-42. Available from: http://www.ncbi.nlm.nih.gov/pubmed/15574356
Shapshak P, Goodkin K, Duncan R, Nath A, Turchan-Cholewo J, Davis W, Kangueane P, Duran EM, Ziegler F, Minagar A, et al. Gene expression in human neurons in culture and brain. In: Use of differing Microarray and Bioinformatics technologies, 11th SNIP Conference. Use of differing Microarray and Bioinformatics technologies, 11th SNIP Conference. Clearwater, FL; 2005.
Shapshak P, Duncan R, Nath A, Turchen J, Minagar A, Davis W, Seth R, Kazic T. Neuron model for cocaine abuse and HIV infection of brain (NeuroAIDS): gene expression in cultured human neurons exposed to cocaine and HIV-1 proteins gp120 and tat. In: The Third Symposium on the Functional Genomics of Critical Illness and Injury. The Third Symposium on the Functional Genomics of Critical Illness and Injury. NIH, Bethesda, MD; 2005.
Shapshak P, Goodkin K, Kazic T, Solveig AM, Shapshak P, Nath A. Use of differing microarray and bioinformatics technologies for gene expression in human neurons in culture and brain. In: 2005 NIDA International Forum: linking drug abuse and HIV/AIDS Research. 2005 NIDA International Forum: linking drug abuse and HIV/AIDS Research. Orlando, FL; 2005.
Shapshak P, Duncan R, Torres-Munoz JE, Duran EM, Minagar A, Petito C. Analytic approaches to differential gene expression in AIDS versus control brains. Frontiers in Bioscience: A Journal and Virtual Library [Internet]. 2004 ;9:2935-46. Available from: http://www.ncbi.nlm.nih.gov/pubmed/15353327
Shapshak P, Duncan R, Minagar A, Rodriguez de la Vega P, Stewart RV, Goodkin K. Elevated expression of IFN-gamma in the HIV-1 infected brain. Frontiers in Bioscience: A Journal and Virtual Library [Internet]. 2004 ;9:1073-81. Available from: http://www.ncbi.nlm.nih.gov/pubmed/14977530
Shapshak P. Brain gene expression. In: International Symposium on Bioinfomatics & Cybermatics. International Symposium on Bioinfomatics & Cybermatics. Orlando, FL; 2004.
Shapshak P, Duncan R, Nath A, Turchen J, Minagar A, Davis W, Seth R, Kazic T. Gene expression methods in NeuroAIDS. In: Harvard University Channing Laboratories Statistics Society. Harvard University Channing Laboratories Statistics Society. Boston, MA; 2004.
Shapshak P, Duncan R, Minagar A, Seth R, Kazic T. Gene expression in NeuroAIDS. In: International Neurovirology Society Conference. International Neurovirology Society Conference. Baltimore, MD; 2004.
Shapshak P, Duncan R, Shaw S, Nath A, Turchen J, Davis W, Duran EM, Ziegler F, Minagar A, Seth R, et al. Gene expression in human brain and cultured human neurons exposed to cocaine and HIV-I proteins gpl20 and tat. In: 8th World Multiconf on Systematics, Cybernetics, and lnformatics. 8th World Multiconf on Systematics, Cybernetics, and lnformatics. Orlando, FL; 2004.
Shapshak P, Duncan R, Minagar A, Goodkin K, Duran EM, Nath A, Turchan-Cholewo J, Davis W, Seth R, Kazic T. The use of bioinformatics for gene expression studies in NeuroAIDS. In: NIH 10th Annual Human Brain Project Conference. NIH 10th Annual Human Brain Project Conference. Bethesda, MD; 2004.
Shapshak P. Bioinformatics in Neurodegenerative Disease. 2003 .
Shapshak P, Stewart RV, Rodriguez de la Vega P, Dominguez B, Fujimura RK, Segal DM, Sun NC, Delgado S, Petito C. Brain macrophage surface marker expression with HIV-1 infection and drug abuse: a preliminary study. Journal of NeuroAIDS [Internet]. 2002 ;2(3):37-50. Available from: http://www.ncbi.nlm.nih.gov/pubmed/16873198
Shapshak P, Stengel R. Discovering brain mechanisms and the rules of molecular biology. In: 6th World Multiconference on Systemics, Cybernetics and Informatics. 6th World Multiconference on Systemics, Cybernetics and Informatics. Orlando, FL; 2002.
Shapshak P. Invited Chair. In: International Symposium on Bioinformatics & Cybernetics. International Symposium on Bioinformatics & Cybernetics. Orlando, FL; 2002.
Shapshak P. Brain gene expression studies in dementia: Drug abuse, HIV, and amyloid. In: 3rd International Differential Gene Expression Symposium. 3rd International Differential Gene Expression Symposium. Vanderbilt University School of Medicine; 2002.

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